Publications
2024
The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars
Jarkko Salojärvi, Aditi Rambani, Zhe Yu, Romain Guyot, Susan Strickler, Maud Lepelley, Cui Wang, Sitaram Rajaraman, Pasi Rastas, Chunfang Zheng, Daniella Santos Muñoz, João Meidanis, Alexandre Rossi Paschoal, Yves Bawin, Trevor J. Krabbenhoft, Zhen Qin Wang, Steven J. Fleck, Rudy Aussel, Laurence Bellanger, Aline Charpagne, Coralie Fournier, Mohamed Kassam, Gregory Lefebvre, Sylviane Métairon, Déborah Moine, Michel Rigoreau, Jens Stolte, Perla Hamon, Emmanuel Couturon, Christine Tranchant-Dubreuil, Minakshi Mukherjee, Tianying Lan, Jan Engelhardt, Peter Stadler, Samara Mireza Correia De Lemos, Suzana Ivamoto Suzuki, Ucu Sumirat, Ching Man Wai, Nicolas Dauchot, Simon Orozco-Arias, Andrea Garavito, Catherine Kiwuka, Pascal Musoli, Anne Nalukenge, Erwan Guichoux, Havinga Reinout, Martin Smit, Lorenzo Carretero-Paulet, Oliveiro Guerreiro Filho, Masako Toma Braghini, Lilian Padilha, Gustavo Hiroshi Sera, Tom Ruttink, Robert Henry, Pierre Marraccini, Yves Van de Peer, Alan Andrade, Douglas Domingues, Giovanni Giuliano, Lukas Mueller, Luiz Filipe Pereira, Stephane Plaisance, Valerie Poncet, Stephane Rombauts, David Sankoff, Victor A. Albert, Dominique Crouzillat , Alexandre de Kochko & Patrick Descombes. Nat Genet (2024). https://doi.org/10.1038/s41588-024-01695-w
2023
Analysis of > 3400 worldwide eggplant accessions reveals two independent domestication events and multiple migration‐diversification routes
Barchi, Lorenzo, Giuseppe Aprea, M. Timothy Rabanus‐Wallace, Laura Toppino, David Alonso, Ezio Portis, Sergio Lanteri et al. The Plant Journal 116, no. 6 (2023): 1667-1680. https://doi.org/10.1111/tpj.16455
Induction of water stress in major Solanum crops: A review on methodologies and their application for identifying drought tolerant materials
Martín Flores-Saavedra, Mariola Plazas, Santiago Vilanova, Jaime Prohens, Pietro Gramazio
Scientia Horticulturae, Volume 318, 2023, 112105. doi: https://doi.org/10.1016/j.scienta.2023.112105
QTL mapping for kernel-related traits in a durum wheat x T. dicoccum segregating population
Valladares García, Ana Paola, Francesca Desiderio, Rosanna Simeone, Roberto Ciorba, Agostino Fricano, Davide Guerra, Luigi Cattivelli, and Elisabetta Mazzucotelli. Frontiers in Plant Science 14 (2023): 1253385. doi: https://doi.org/10.3389/fpls.2023.1253385
Conventional and new genetic resources for an eggplant breeding revolution
Pietro Gramazio, David Alonso, Andrea Arrones, Gloria Villanueva, Mariola Plazas, Laura Toppino, Lorenzo Barchi, Ezio Portis, Paola Ferrante, Sergio Lanteri, Giuseppe Leonardo Rotino, Giovanni Giuliano, Santiago Vilanova, Jaime Prohens
Journal of Experimental Botany, Volume 74, Issue 20, 31 October 2023, Pages 6285–6305, https://doi.org/10.1093/jxb/erad260
Complex evaluation of wild pear
Adrienn Gyurkó, Borbála Baktay, Anna Varga, Zsolt Szani
Acta Universitatis Sapientiae, Agriculture and Environment, 15 (2023) 66–73. doi: 10.2478/ausae-2023-0006
Gyümölcstermő növények megőrzése génbanki körülmények között (Preservation of fruit-bearing plants under gene bank conditions)
Adrienn, Gyurkó, Szücs-Nagy Vivien, and Simon Attila. Gradus Vol 10, No 1 (2023). doi: https://doi.org/10.47833/2023.1.AGR.008
Plant sample collection and shipment for multi‐omic analyses and phytosanitary evaluation
Karakas, Esra, Paola Ferrante, Roland Schafleitner, Giovanni Giuliano, Alisdair R. Fernie, and Saleh Alseekh. Current Protocols 3, no. 12 (2023): e952. doi: https://doi.org/10.1002/cpz1.952
Genealogical tracing of Olea europaea species and pedigree relationships of var. europaea using chloroplast and nuclear markers
Mariotti, Roberto, Angjelina Belaj, Raúl De la Rosa, Rosario Muleo, Marco Cirilli, Ivano Forgione, Maria Cristina Valeri, and Soraya Mousavi. BMC Plant Biology 23, no. 1 (2023): 452. doi: https://doi.org/10.1186/s12870-023-04440-3
A new wild emmer wheat panel allows to map new loci associated with resistance to stem rust at seedling stage
Anna Maria Mastrangelo, Pablo Roncallo, Oadi Matny, Radim Čegan, Brian Steffenson, Viviana Echenique, Jan Šafář, Raffaella Battaglia, Delfina Barabaschi, Luigi Cattivelli, Hakan Özkan, Elisabetta Mazzucotelli. The Plant Genome (2023): e20413. doi: https://doi.org/10.1002/tpg2.20413
Multi-environment association study highlights candidate genes for robust agronomic quantitative trait loci in a novel worldwide Capsicum core collection
Louis McLeod, Lorenzo Barchi, Giorgio Tumino, Pasquale Tripodi, Jérémy Salinier, Christophe Gros, Hatice Filiz Boyaci, Ramazan Ozalp, Yelena Borovsky, Roland Schafleitner, Derek Barchenger, Richard Finkers, Matthijs Brouwer, Nils Stein, Mark Timothy Rabanus-Wallace, Giovanni Giuliano, Roeland Voorrips, Ilan Paran, Véronique Lefebvre
Plant J, 116, no. 5 (2023): 1508-1528. https://doi.org/10.1111/tpj.16425
A multi-omic Nicotiana benthamiana resource for fundamental research and biotechnology
Ranawaka, Buddhini, Jiyuan An, Michał T. Lorenc, Hyungtaek Jung, Maria Sulli, Giuseppe Aprea, Sally Roden et al.
Nature Plants; 9, no. 9 (2023): 1558-1571. doi: https://doi.org/10.1038/s41477-023-01489-8
The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars
Salojärvi, Jarkko, Aditi Rambani, Zhe Yu, Romain Guyot, Susan Strickler, Maud Lepelley, Cui Wang et al. bioRxiv (2023): 2023-09. doi: https://doi.org/10.1101/2023.09.06.556570